/EXTERNAL BLUEPRINT/K011938_K011939_2_lane_gembs/EXTERNAL-K011939_1894881_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 41076970 | 100.00 % | 20538485 | 100.00 % | 20538485 | 100.00 % |
| General Reads | 34236200 | 83.35 % | 17181540 | 83.66 % | 17054660 | 83.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 14 | 0.00 % | 7 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6840756 | 16.65 % | 3356938 | 16.34 % | 3483818 | 16.96 % |
| Bisulfite_reads C2T | 17701414 | 43.09 % | 8881895 | 43.25 % | 8819519 | 42.94 % |
| Bisulfite_reads G2A | 16534800 | 40.25 % | 8299652 | 40.41 % | 8235148 | 40.10 % |
| Concept | Value |
|---|---|
| Unique Fragments | 13105411 |
| Average Unique | 63.81 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1080441257 | 34.16 % | 421996996 | 26.68 % | 658444261 | 41.64 % |
| Base Counts Overall C | 482384921 | 15.25 % | 92983672 | 5.88 % | 389401249 | 24.62 % |
| Base Counts Overall G | 492573897 | 15.57 % | 394218282 | 24.93 % | 98355615 | 6.22 % |
| Base Counts Overall T | 1065776781 | 33.70 % | 651370063 | 41.19 % | 414406718 | 26.20 % |
| Base Counts Overall N | 41749834 | 1.32 % | 20894332 | 1.32 % | 20855502 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 16141492 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 20538485 |
| 76 | 20538485 |
| Insert Size Histogram |
|---|
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