/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011860_1894802_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 13443188 | 100.00 % | 6721594 | 100.00 % | 6721594 | 100.00 % |
| General Reads | 6863341 | 51.05 % | 3453957 | 51.39 % | 3409384 | 50.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6579845 | 48.95 % | 3267636 | 48.61 % | 3312209 | 49.28 % |
| Bisulfite_reads C2T | 3534150 | 26.29 % | 1778193 | 26.45 % | 1755957 | 26.12 % |
| Bisulfite_reads G2A | 3329193 | 24.76 % | 1675765 | 24.93 % | 1653428 | 24.60 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2686169 |
| Average Unique | 39.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 304885677 | 29.45 % | 146500924 | 28.31 % | 158384753 | 30.60 % |
| Base Counts Overall C | 202223679 | 19.54 % | 90985522 | 17.58 % | 111238157 | 21.49 % |
| Base Counts Overall G | 206767037 | 19.98 % | 112795721 | 21.79 % | 93971316 | 18.16 % |
| Base Counts Overall T | 307615354 | 29.72 % | 160469618 | 31.00 % | 147145736 | 28.43 % |
| Base Counts Overall N | 13633729 | 1.32 % | 6810953 | 1.32 % | 6822776 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3293420 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 6721594 |
| 76 | 6721594 |
| Insert Size Histogram |
|---|
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