/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011861_1894803_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18441054 | 100.00 % | 9220527 | 100.00 % | 9220527 | 100.00 % |
| General Reads | 6998581 | 37.95 % | 3523630 | 38.22 % | 3474951 | 37.69 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11442471 | 62.05 % | 5696896 | 61.78 % | 5745575 | 62.31 % |
| Bisulfite_reads C2T | 3609078 | 19.57 % | 1817208 | 19.71 % | 1791870 | 19.43 % |
| Bisulfite_reads G2A | 3389505 | 18.38 % | 1706423 | 18.51 % | 1683082 | 18.25 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2709846 |
| Average Unique | 29.39 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 414458013 | 29.19 % | 203550537 | 28.67 % | 210907476 | 29.71 % |
| Base Counts Overall C | 280237352 | 19.74 % | 128998508 | 18.17 % | 151238844 | 21.30 % |
| Base Counts Overall G | 287420564 | 20.24 % | 153730227 | 21.65 % | 133690337 | 18.83 % |
| Base Counts Overall T | 419149877 | 29.52 % | 214360732 | 30.19 % | 204789145 | 28.84 % |
| Base Counts Overall N | 18695352 | 1.32 % | 9340575 | 1.32 % | 9354777 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3340584 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9220527 |
| 76 | 9220527 |
| Insert Size Histogram |
|---|
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