/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011862_1894804_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17425658 | 100.00 % | 8712829 | 100.00 % | 8712829 | 100.00 % |
| General Reads | 8924268 | 51.21 % | 4491840 | 51.55 % | 4432428 | 50.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 2 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8501388 | 48.79 % | 4220987 | 48.45 % | 4280401 | 49.13 % |
| Bisulfite_reads C2T | 4599201 | 26.39 % | 2314660 | 26.57 % | 2284541 | 26.22 % |
| Bisulfite_reads G2A | 4325069 | 24.82 % | 2177182 | 24.99 % | 2147887 | 24.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3476885 |
| Average Unique | 39.91 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 384480227 | 28.65 % | 181431945 | 27.04 % | 203048282 | 30.27 % |
| Base Counts Overall C | 273869532 | 20.41 % | 120014745 | 17.89 % | 153854787 | 22.93 % |
| Base Counts Overall G | 280058324 | 20.87 % | 156718908 | 23.36 % | 123339416 | 18.38 % |
| Base Counts Overall T | 385702022 | 28.75 % | 203893798 | 30.39 % | 181808224 | 27.10 % |
| Base Counts Overall N | 17665561 | 1.32 % | 8828437 | 1.32 % | 8837124 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4282139 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8712829 |
| 76 | 8712829 |
| Insert Size Histogram |
|---|
 |