/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011863_1894805_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16379428 | 100.00 % | 8189714 | 100.00 % | 8189714 | 100.00 % |
| General Reads | 9798913 | 59.82 % | 4919520 | 60.07 % | 4879393 | 59.58 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6580515 | 40.18 % | 3270194 | 39.93 % | 3310321 | 40.42 % |
| Bisulfite_reads C2T | 5049686 | 30.83 % | 2534735 | 30.95 % | 2514951 | 30.71 % |
| Bisulfite_reads G2A | 4749227 | 29.00 % | 2384785 | 29.12 % | 2364442 | 28.87 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3785005 |
| Average Unique | 46.22 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 377495500 | 29.93 % | 178453372 | 28.30 % | 199042128 | 31.56 % |
| Base Counts Overall C | 247315177 | 19.61 % | 106822410 | 16.94 % | 140492767 | 22.28 % |
| Base Counts Overall G | 251305925 | 19.93 % | 141685048 | 22.47 % | 109620877 | 17.38 % |
| Base Counts Overall T | 368499552 | 29.22 % | 195351225 | 30.98 % | 173148327 | 27.46 % |
| Base Counts Overall N | 16599802 | 1.32 % | 8295923 | 1.32 % | 8303879 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4678564 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8189714 |
| 76 | 8189714 |
| Insert Size Histogram |
|---|
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