/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011864_1894806_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17910174 | 100.00 % | 8955087 | 100.00 % | 8955087 | 100.00 % |
| General Reads | 7687185 | 42.92 % | 3868744 | 43.20 % | 3818441 | 42.64 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 3 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10222979 | 57.08 % | 5086340 | 56.80 % | 5136639 | 57.36 % |
| Bisulfite_reads C2T | 3963334 | 22.13 % | 1994423 | 22.27 % | 1968911 | 21.99 % |
| Bisulfite_reads G2A | 3723861 | 20.79 % | 1874324 | 20.93 % | 1849537 | 20.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3001658 |
| Average Unique | 33.52 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 389581355 | 28.25 % | 192704450 | 27.95 % | 196876905 | 28.55 % |
| Base Counts Overall C | 285909298 | 20.73 % | 134466616 | 19.50 % | 151442682 | 21.96 % |
| Base Counts Overall G | 291652364 | 21.15 % | 153617935 | 22.28 % | 138034429 | 20.02 % |
| Base Counts Overall T | 393774434 | 28.55 % | 199676105 | 28.96 % | 194098329 | 28.15 % |
| Base Counts Overall N | 18165947 | 1.32 % | 9076593 | 1.32 % | 9089354 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3699969 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8955087 |
| 76 | 8955087 |
| Insert Size Histogram |
|---|
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