/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011917_1894859_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 32992804 | 100.00 % | 16496402 | 100.00 % | 16496402 | 100.00 % |
| General Reads | 12396792 | 37.57 % | 6235821 | 37.80 % | 6160971 | 37.35 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 21 | 0.00 % | 10 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20595991 | 62.43 % | 10260571 | 62.20 % | 10335420 | 62.65 % |
| Bisulfite_reads C2T | 6393406 | 19.38 % | 3215982 | 19.50 % | 3177424 | 19.26 % |
| Bisulfite_reads G2A | 6003407 | 18.20 % | 3019849 | 18.31 % | 2983558 | 18.09 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4824566 |
| Average Unique | 29.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 703158923 | 27.68 % | 356005534 | 28.03 % | 347153389 | 27.33 % |
| Base Counts Overall C | 542633722 | 21.36 % | 267521267 | 21.06 % | 275112455 | 21.66 % |
| Base Counts Overall G | 551948088 | 21.73 % | 278230694 | 21.90 % | 273717394 | 21.55 % |
| Base Counts Overall T | 709246504 | 27.92 % | 351751068 | 27.69 % | 357495436 | 28.14 % |
| Base Counts Overall N | 33458671 | 1.32 % | 16714391 | 1.32 % | 16744280 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5957481 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 16496402 |
| 76 | 16496402 |
| Insert Size Histogram |
|---|
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