/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs/EXTERNAL-K011918_1894860_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 35125596 | 100.00 % | 17562798 | 100.00 % | 17562798 | 100.00 % |
| General Reads | 15543064 | 44.25 % | 7820814 | 44.53 % | 7722250 | 43.97 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 17 | 0.00 % | 13 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19582515 | 55.75 % | 9741971 | 55.47 % | 9840544 | 56.03 % |
| Bisulfite_reads C2T | 8028429 | 22.86 % | 4038684 | 23.00 % | 3989745 | 22.72 % |
| Bisulfite_reads G2A | 7514652 | 21.39 % | 3782143 | 21.53 % | 3732509 | 21.25 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6071085 |
| Average Unique | 34.57 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 754545175 | 27.90 % | 368082010 | 27.22 % | 386463165 | 28.58 % |
| Base Counts Overall C | 572246898 | 21.16 % | 266139269 | 19.68 % | 306107629 | 22.64 % |
| Base Counts Overall G | 584417914 | 21.61 % | 311606776 | 23.04 % | 272811138 | 20.17 % |
| Base Counts Overall T | 757850998 | 28.02 % | 388713488 | 28.74 % | 369137510 | 27.30 % |
| Base Counts Overall N | 35609907 | 1.32 % | 17793903 | 1.32 % | 17816004 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7474745 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 17562798 |
| 76 | 17562798 |
| Insert Size Histogram |
|---|
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