/EXTERNAL BLUEPRINT/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 218734742 | 100.00 % | 109367371 | 100.00 % | 109367371 | 100.00 % |
| General Reads | 115875600 | 52.98 % | 58296299 | 53.30 % | 57579301 | 52.65 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 65 | 0.00 % | 37 | 0.00 % | 28 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 102859077 | 47.02 % | 51071035 | 46.70 % | 51788042 | 47.35 % |
| Bisulfite_reads C2T | 59746059 | 27.31 % | 30053347 | 27.48 % | 29692712 | 27.15 % |
| Bisulfite_reads G2A | 56129606 | 25.66 % | 28242989 | 25.82 % | 27886617 | 25.50 % |
| Concept | Value |
|---|---|
| Unique Fragments | 45196411 |
| Average Unique | 41.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 4884864573 | 29.00 % | 2359831665 | 28.02 % | 2525032908 | 29.98 % |
| Base Counts Overall C | 3385822079 | 20.10 % | 1529858778 | 18.17 % | 1855963301 | 22.04 % |
| Base Counts Overall G | 3450725083 | 20.49 % | 1884592364 | 22.38 % | 1566132719 | 18.60 % |
| Base Counts Overall T | 4899399219 | 29.09 % | 2536193527 | 30.12 % | 2363205692 | 28.06 % |
| Base Counts Overall N | 221764180 | 1.32 % | 110811233 | 1.32 % | 110952947 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 55581080 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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