/EXTERNAL BLUEPRINT/methylation/K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs
BACK
SAMPLE K011855_K011860_K011861_K011862_K011863_K011864_K011917_K011918_8_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
14453801 |
9707 |
0.07 % |
| NonRefCpG |
722619 |
30 |
0.00 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
2258811 |
12.81 % |
431 |
1.75 % |
170872 |
20.58 % |
9 |
5.74 % |
| Intermediate (0.3-0.7) |
6460322 |
36.64 % |
4350 |
17.66 % |
314316 |
37.85 % |
35 |
22.73 % |
| Methylated (0.7-1) |
8913325 |
50.55 % |
19853 |
80.59 % |
345235 |
41.57 % |
112 |
71.53 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.700 |
|
0.870 |
|
0.620 |
|
0.840 |
|