/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011859_1894801_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 44275970 | 100.00 % | 22137985 | 100.00 % | 22137985 | 100.00 % |
| General Reads | 29833244 | 67.38 % | 14972061 | 67.63 % | 14861183 | 67.13 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14442722 | 32.62 % | 7165922 | 32.37 % | 7276800 | 32.87 % |
| Bisulfite_reads C2T | 15413554 | 34.81 % | 7734263 | 34.94 % | 7679291 | 34.69 % |
| Bisulfite_reads G2A | 14419694 | 32.57 % | 7237800 | 32.69 % | 7181894 | 32.44 % |
| Concept | Value |
|---|---|
| Unique Fragments | 11275886 |
| Average Unique | 50.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1066804123 | 31.29 % | 460885441 | 27.04 % | 605918682 | 35.55 % |
| Base Counts Overall C | 608747925 | 17.86 % | 219693078 | 12.89 % | 389054847 | 22.82 % |
| Base Counts Overall G | 622518182 | 18.26 % | 396328188 | 23.25 % | 226189994 | 13.27 % |
| Base Counts Overall T | 1066488926 | 31.28 % | 605293774 | 35.51 % | 461195152 | 27.06 % |
| Base Counts Overall N | 44690534 | 1.31 % | 22424364 | 1.32 % | 22266170 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 13853257 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 22137985 |
| 76 | 22137985 |
| Insert Size Histogram |
|---|
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