/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011891_1894833_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16639326 | 100.00 % | 8319663 | 100.00 % | 8319663 | 100.00 % |
| General Reads | 9418398 | 56.60 % | 4750239 | 57.10 % | 4668159 | 56.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7220928 | 43.40 % | 3569424 | 42.90 % | 3651504 | 43.89 % |
| Bisulfite_reads C2T | 4851593 | 29.16 % | 2445965 | 29.40 % | 2405628 | 28.91 % |
| Bisulfite_reads G2A | 4566805 | 27.45 % | 2304274 | 27.70 % | 2262531 | 27.19 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3664334 |
| Average Unique | 44.04 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 380982981 | 29.74 % | 169092912 | 26.40 % | 211890069 | 33.08 % |
| Base Counts Overall C | 247384272 | 19.31 % | 97433732 | 15.21 % | 149950540 | 23.41 % |
| Base Counts Overall G | 252765195 | 19.73 % | 152250950 | 23.77 % | 100514245 | 15.69 % |
| Base Counts Overall T | 383307530 | 29.92 % | 213415051 | 33.31 % | 169892479 | 26.52 % |
| Base Counts Overall N | 16788124 | 1.31 % | 8421406 | 1.31 % | 8366718 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4501799 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8319663 |
| 76 | 8319663 |
| Insert Size Histogram |
|---|
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