/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011892_1894834_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19485746 | 100.00 % | 9742873 | 100.00 % | 9742873 | 100.00 % |
| General Reads | 13547485 | 69.53 % | 6831333 | 70.12 % | 6716152 | 68.93 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5938259 | 30.47 % | 2911539 | 29.88 % | 3026720 | 31.07 % |
| Bisulfite_reads C2T | 6969293 | 35.77 % | 3513154 | 36.06 % | 3456139 | 35.47 % |
| Bisulfite_reads G2A | 6578194 | 33.76 % | 3318180 | 34.06 % | 3260014 | 33.46 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5344967 |
| Average Unique | 54.86 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 415236129 | 27.67 % | 202055401 | 26.93 % | 213180728 | 28.42 % |
| Base Counts Overall C | 320490871 | 21.36 % | 153209051 | 20.42 % | 167281820 | 22.30 % |
| Base Counts Overall G | 324588736 | 21.63 % | 169204744 | 22.55 % | 155383992 | 20.71 % |
| Base Counts Overall T | 420431526 | 28.02 % | 215873613 | 28.78 % | 204557913 | 27.27 % |
| Base Counts Overall N | 19655180 | 1.31 % | 9858412 | 1.31 % | 9796768 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6534770 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9742873 |
| 76 | 9742873 |
| Insert Size Histogram |
|---|
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