/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011925_1894867_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 39387018 | 100.00 % | 19693509 | 100.00 % | 19693509 | 100.00 % |
| General Reads | 24525166 | 62.27 % | 12369866 | 62.81 % | 12155300 | 61.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 21 | 0.00 % | 10 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14861831 | 37.73 % | 7323633 | 37.19 % | 7538198 | 38.28 % |
| Bisulfite_reads C2T | 12614621 | 32.03 % | 6360730 | 32.30 % | 6253891 | 31.76 % |
| Bisulfite_reads G2A | 11910566 | 30.24 % | 6009146 | 30.51 % | 5901420 | 29.97 % |
| Concept | Value |
|---|---|
| Unique Fragments | 9421850 |
| Average Unique | 47.84 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 880515821 | 29.03 % | 407074551 | 26.84 % | 473441270 | 31.22 % |
| Base Counts Overall C | 617305497 | 20.35 % | 266934267 | 17.60 % | 350371230 | 23.11 % |
| Base Counts Overall G | 627683936 | 20.70 % | 355263379 | 23.43 % | 272420557 | 17.96 % |
| Base Counts Overall T | 867585906 | 28.61 % | 467218960 | 30.81 % | 400366946 | 26.40 % |
| Base Counts Overall N | 39709226 | 1.31 % | 19909036 | 1.31 % | 19800190 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 11646711 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 19693509 |
| 76 | 19693509 |
| Insert Size Histogram |
|---|
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