/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs/EXTERNAL-K011894_1894836_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18195326 | 100.00 % | 9097663 | 100.00 % | 9097663 | 100.00 % |
| General Reads | 8199457 | 45.06 % | 4140052 | 45.51 % | 4059405 | 44.62 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 11 | 0.00 % | 5 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9995858 | 54.94 % | 4957606 | 54.49 % | 5038252 | 55.38 % |
| Bisulfite_reads C2T | 4231895 | 23.26 % | 2136074 | 23.48 % | 2095821 | 23.04 % |
| Bisulfite_reads G2A | 3967573 | 21.81 % | 2003983 | 22.03 % | 1963590 | 21.58 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3156928 |
| Average Unique | 34.70 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 403504699 | 28.80 % | 193386531 | 27.61 % | 210118168 | 29.99 % |
| Base Counts Overall C | 284437633 | 20.30 % | 129398556 | 18.47 % | 155039077 | 22.13 % |
| Base Counts Overall G | 289642637 | 20.67 % | 157519139 | 22.49 % | 132123498 | 18.86 % |
| Base Counts Overall T | 404970549 | 28.90 % | 210992120 | 30.12 % | 193978429 | 27.69 % |
| Base Counts Overall N | 18484584 | 1.32 % | 9223705 | 1.32 % | 9260879 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3897122 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9097663 |
| 76 | 9097663 |
| Insert Size Histogram |
|---|
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