/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs/EXTERNAL-K011895_1894837_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18427616 | 100.00 % | 9213808 | 100.00 % | 9213808 | 100.00 % |
| General Reads | 11576584 | 62.82 % | 5838044 | 63.36 % | 5738540 | 62.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 3 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6851028 | 37.18 % | 3375761 | 36.64 % | 3475267 | 37.72 % |
| Bisulfite_reads C2T | 5969030 | 32.39 % | 3009162 | 32.66 % | 2959868 | 32.12 % |
| Bisulfite_reads G2A | 5607558 | 30.43 % | 2828885 | 30.70 % | 2778673 | 30.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4528729 |
| Average Unique | 49.15 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 404607939 | 28.52 % | 196143381 | 27.65 % | 208464558 | 29.38 % |
| Base Counts Overall C | 291780987 | 20.56 % | 136080758 | 19.18 % | 155700229 | 21.95 % |
| Base Counts Overall G | 297116140 | 20.94 % | 158299601 | 22.31 % | 138816539 | 19.57 % |
| Base Counts Overall T | 406700254 | 28.66 % | 209595556 | 29.54 % | 197104698 | 27.78 % |
| Base Counts Overall N | 18721112 | 1.32 % | 9343920 | 1.32 % | 9377192 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5550977 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9213808 |
| 76 | 9213808 |
| Insert Size Histogram |
|---|
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