/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs/EXTERNAL-K011896_1894838_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17402274 | 100.00 % | 8701137 | 100.00 % | 8701137 | 100.00 % |
| General Reads | 7693056 | 44.21 % | 3880877 | 44.60 % | 3812179 | 43.81 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 0 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9709217 | 55.79 % | 4820260 | 55.40 % | 4888957 | 56.19 % |
| Bisulfite_reads C2T | 3966040 | 22.79 % | 1999999 | 22.99 % | 1966041 | 22.60 % |
| Bisulfite_reads G2A | 3727017 | 21.42 % | 1880878 | 21.62 % | 1846139 | 21.22 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2979238 |
| Average Unique | 34.24 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 368649743 | 27.51 % | 183809408 | 27.43 % | 184840335 | 27.59 % |
| Base Counts Overall C | 288929592 | 21.56 % | 141115536 | 21.06 % | 147814056 | 22.06 % |
| Base Counts Overall G | 292819218 | 21.85 % | 149571505 | 22.32 % | 143247713 | 21.38 % |
| Base Counts Overall T | 371902409 | 27.75 % | 186669943 | 27.86 % | 185232466 | 27.65 % |
| Base Counts Overall N | 17674136 | 1.32 % | 8821157 | 1.32 % | 8852979 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3675996 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8701137 |
| 76 | 8701137 |
| Insert Size Histogram |
|---|
 |