/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs/EXTERNAL-K011897_1894839_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19305934 | 100.00 % | 9652967 | 100.00 % | 9652967 | 100.00 % |
| General Reads | 9318839 | 48.27 % | 4700091 | 48.69 % | 4618748 | 47.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9987087 | 51.73 % | 4952872 | 51.31 % | 5034215 | 52.15 % |
| Bisulfite_reads C2T | 4810243 | 24.92 % | 2425194 | 25.12 % | 2385049 | 24.71 % |
| Bisulfite_reads G2A | 4508604 | 23.35 % | 2274901 | 23.57 % | 2233703 | 23.14 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3603596 |
| Average Unique | 37.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 426223524 | 28.67 % | 197604532 | 26.59 % | 228618992 | 30.76 % |
| Base Counts Overall C | 303963367 | 20.45 % | 131924928 | 17.75 % | 172038439 | 23.15 % |
| Base Counts Overall G | 311477419 | 20.95 % | 175432006 | 23.60 % | 136045413 | 18.30 % |
| Base Counts Overall T | 425273882 | 28.61 % | 228527847 | 30.75 % | 196746035 | 26.47 % |
| Base Counts Overall N | 19618726 | 1.32 % | 9789146 | 1.32 % | 9829580 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4439784 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9652967 |
| 76 | 9652967 |
| Insert Size Histogram |
|---|
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