/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs/EXTERNAL-K011898_1894840_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18689642 | 100.00 % | 9344821 | 100.00 % | 9344821 | 100.00 % |
| General Reads | 8451700 | 45.22 % | 4259609 | 45.58 % | 4192091 | 44.86 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 14 | 0.00 % | 7 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10237928 | 54.78 % | 5085205 | 54.42 % | 5152723 | 55.14 % |
| Bisulfite_reads C2T | 4362190 | 23.34 % | 2197587 | 23.52 % | 2164603 | 23.16 % |
| Bisulfite_reads G2A | 4089524 | 21.88 % | 2062029 | 22.07 % | 2027495 | 21.70 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3269440 |
| Average Unique | 34.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 405382956 | 28.17 % | 194450141 | 27.02 % | 210932815 | 29.31 % |
| Base Counts Overall C | 301193520 | 20.93 % | 138566863 | 19.26 % | 162626657 | 22.60 % |
| Base Counts Overall G | 308402204 | 21.43 % | 165987778 | 23.07 % | 142414426 | 19.79 % |
| Base Counts Overall T | 405130514 | 28.15 % | 211069403 | 29.33 % | 194061111 | 26.97 % |
| Base Counts Overall N | 18993240 | 1.32 % | 9477032 | 1.32 % | 9516208 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4025857 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9344821 |
| 76 | 9344821 |
| Insert Size Histogram |
|---|
 |