/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs/EXTERNAL-K011928_1894870_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 53949638 | 100.00 % | 26974819 | 100.00 % | 26974819 | 100.00 % |
| General Reads | 20476103 | 37.95 % | 10331490 | 38.30 % | 10144613 | 37.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 6 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 33473519 | 62.05 % | 16643323 | 61.70 % | 16830196 | 62.39 % |
| Bisulfite_reads C2T | 10576066 | 19.60 % | 5334709 | 19.78 % | 5241357 | 19.43 % |
| Bisulfite_reads G2A | 9900053 | 18.35 % | 4996787 | 18.52 % | 4903266 | 18.18 % |
| Concept | Value |
|---|---|
| Unique Fragments | 7873034 |
| Average Unique | 29.19 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1169182074 | 28.15 % | 578642948 | 27.86 % | 590539126 | 28.43 % |
| Base Counts Overall C | 870803807 | 20.96 % | 419760699 | 20.21 % | 451043108 | 21.72 % |
| Base Counts Overall G | 881787091 | 21.23 % | 456351936 | 21.97 % | 425435155 | 20.48 % |
| Base Counts Overall T | 1177550099 | 28.35 % | 594958684 | 28.64 % | 582591415 | 28.05 % |
| Base Counts Overall N | 54799055 | 1.32 % | 27346796 | 1.32 % | 27452259 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 9724727 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 26974819 |
| 76 | 26974819 |
| Insert Size Histogram |
|---|
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