/EXTERNAL BLUEPRINT/K011894_K011895_K011896_K011897_K011898_K011927_K011928_7_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 189807504 | 100.00 % | 94903752 | 100.00 % | 94903752 | 100.00 % |
| General Reads | 97041420 | 51.13 % | 48940809 | 51.57 % | 48100611 | 50.68 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 69 | 0.00 % | 33 | 0.00 % | 36 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 92766015 | 48.87 % | 45962910 | 48.43 % | 46803105 | 49.32 % |
| Bisulfite_reads C2T | 50096619 | 26.39 % | 25257219 | 26.61 % | 24839400 | 26.17 % |
| Bisulfite_reads G2A | 46944870 | 24.73 % | 23683623 | 24.96 % | 23261247 | 24.51 % |
| Concept | Value |
|---|---|
| Unique Fragments | 37324912 |
| Average Unique | 39.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 4276272142 | 29.26 % | 2003714229 | 27.42 % | 2272557913 | 31.10 % |
| Base Counts Overall C | 2905758909 | 19.88 % | 1267322110 | 17.34 % | 1638436799 | 22.42 % |
| Base Counts Overall G | 2960140012 | 20.25 % | 1664920958 | 22.78 % | 1295219054 | 17.72 % |
| Base Counts Overall T | 4280178258 | 29.29 % | 2275402907 | 31.14 % | 2004775351 | 27.43 % |
| Base Counts Overall N | 192828487 | 1.32 % | 96228700 | 1.32 % | 96599787 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 46048401 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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