/EXTERNAL BLUEPRINT/K011940_K011941_K011942_K011943_K011946_5_lane_gembs/EXTERNAL-K011940_1894882_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14266708 | 100.00 % | 7133354 | 100.00 % | 7133354 | 100.00 % |
| General Reads | 10005242 | 70.13 % | 5046420 | 70.74 % | 4958822 | 69.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4261466 | 29.87 % | 2086934 | 29.26 % | 2174532 | 30.48 % |
| Bisulfite_reads C2T | 5172879 | 36.26 % | 2608450 | 36.57 % | 2564429 | 35.95 % |
| Bisulfite_reads G2A | 4832363 | 33.87 % | 2437970 | 34.18 % | 2394393 | 33.57 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3882277 |
| Average Unique | 54.42 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 360485339 | 33.25 % | 150408726 | 27.74 % | 210076613 | 38.75 % |
| Base Counts Overall C | 169979043 | 15.68 % | 44214632 | 8.16 % | 125764411 | 23.20 % |
| Base Counts Overall G | 178464929 | 16.46 % | 129541176 | 23.89 % | 48923753 | 9.02 % |
| Base Counts Overall T | 360434776 | 33.24 % | 210748823 | 38.87 % | 149685953 | 27.61 % |
| Base Counts Overall N | 14905721 | 1.37 % | 7221547 | 1.33 % | 7684174 | 1.42 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4815110 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7133354 |
| 75 | 7133354 |
| Insert Size Histogram |
|---|
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