/EXTERNAL BLUEPRINT/K011940_K011941_K011942_K011943_K011946_5_lane_gembs/EXTERNAL-K011941_1894883_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22126026 | 100.00 % | 11063013 | 100.00 % | 11063013 | 100.00 % |
| General Reads | 17574651 | 79.43 % | 8852336 | 80.02 % | 8722315 | 78.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4551373 | 20.57 % | 2210676 | 19.98 % | 2340697 | 21.16 % |
| Bisulfite_reads C2T | 9067138 | 40.98 % | 4566431 | 41.28 % | 4500707 | 40.68 % |
| Bisulfite_reads G2A | 8507515 | 38.45 % | 4285906 | 38.74 % | 4221609 | 38.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6889909 |
| Average Unique | 62.28 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 553265010 | 32.90 % | 228709665 | 27.20 % | 324555345 | 38.60 % |
| Base Counts Overall C | 269664026 | 16.04 % | 71933979 | 8.56 % | 197730047 | 23.52 % |
| Base Counts Overall G | 281885445 | 16.76 % | 203359466 | 24.19 % | 78525979 | 9.34 % |
| Base Counts Overall T | 553644206 | 32.92 % | 325590249 | 38.72 % | 228053957 | 27.12 % |
| Base Counts Overall N | 23119289 | 1.37 % | 11195629 | 1.33 % | 11923660 | 1.42 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8510170 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 11063013 |
| 75 | 11063013 |
| Insert Size Histogram |
|---|
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