/EXTERNAL BLUEPRINT/K011940_K011941_K011942_K011943_K011946_5_lane_gembs/EXTERNAL-K011942_1894884_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17448308 | 100.00 % | 8724154 | 100.00 % | 8724154 | 100.00 % |
| General Reads | 14643636 | 83.93 % | 7378440 | 84.57 % | 7265196 | 83.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 4 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2804668 | 16.07 % | 1345710 | 15.43 % | 1458958 | 16.72 % |
| Bisulfite_reads C2T | 7569738 | 43.38 % | 3813599 | 43.71 % | 3756139 | 43.05 % |
| Bisulfite_reads G2A | 7073902 | 40.54 % | 3564845 | 40.86 % | 3509057 | 40.22 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5681998 |
| Average Unique | 65.13 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 448665651 | 33.83 % | 177355254 | 26.75 % | 271310397 | 40.92 % |
| Base Counts Overall C | 201476442 | 15.19 % | 42890894 | 6.47 % | 158585548 | 23.92 % |
| Base Counts Overall G | 211220207 | 15.93 % | 163501597 | 24.66 % | 47718610 | 7.20 % |
| Base Counts Overall T | 446512233 | 33.67 % | 270459480 | 40.79 % | 176052753 | 26.55 % |
| Base Counts Overall N | 18196875 | 1.37 % | 8828479 | 1.33 % | 9368396 | 1.41 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7058329 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 8724154 |
| 75 | 8724154 |
| Insert Size Histogram |
|---|
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