/EXTERNAL BLUEPRINT/K011940_K011941_K011942_K011943_K011946_5_lane_gembs/EXTERNAL-K011946_1894888_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 38683512 | 100.00 % | 19341756 | 100.00 % | 19341756 | 100.00 % |
| General Reads | 33000267 | 85.31 % | 16715585 | 86.42 % | 16284682 | 84.19 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5683241 | 14.69 % | 2626169 | 13.58 % | 3057072 | 15.81 % |
| Bisulfite_reads C2T | 16988233 | 43.92 % | 8602071 | 44.47 % | 8386162 | 43.36 % |
| Bisulfite_reads G2A | 16012038 | 41.39 % | 8113516 | 41.95 % | 7898522 | 40.84 % |
| Concept | Value |
|---|---|
| Unique Fragments | 12896574 |
| Average Unique | 66.68 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 871427306 | 29.64 % | 416919011 | 28.36 % | 454508295 | 30.92 % |
| Base Counts Overall C | 560921024 | 19.08 % | 248659685 | 16.92 % | 312261339 | 21.24 % |
| Base Counts Overall G | 582781400 | 19.82 % | 317738172 | 21.62 % | 265043228 | 18.03 % |
| Base Counts Overall T | 884448299 | 30.08 % | 467073370 | 31.77 % | 417374929 | 28.39 % |
| Base Counts Overall N | 40368883 | 1.37 % | 19583218 | 1.33 % | 20785665 | 1.41 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 15890893 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 19341756 |
| 75 | 19341756 |
| Insert Size Histogram |
|---|
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