/EXTERNAL BLUEPRINT/K011944_K011945_K011947_3_lane_gembs/EXTERNAL-K011944_1894886_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17391700 | 100.00 % | 8695850 | 100.00 % | 8695850 | 100.00 % |
| General Reads | 10989946 | 63.19 % | 5549318 | 63.82 % | 5440628 | 62.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 357 | 0.00 % | 180 | 0.00 % | 177 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6401397 | 36.81 % | 3146352 | 36.18 % | 3255045 | 37.43 % |
| Bisulfite_reads C2T | 5642629 | 32.44 % | 2848488 | 32.76 % | 2794141 | 32.13 % |
| Bisulfite_reads G2A | 5347674 | 30.75 % | 2701010 | 31.06 % | 2646664 | 30.44 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4289467 |
| Average Unique | 49.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 389717381 | 29.10 % | 180976963 | 27.03 % | 208740418 | 31.17 % |
| Base Counts Overall C | 266736622 | 19.92 % | 115744705 | 17.29 % | 150991917 | 22.55 % |
| Base Counts Overall G | 275405530 | 20.57 % | 154734450 | 23.11 % | 120671080 | 18.02 % |
| Base Counts Overall T | 389827553 | 29.11 % | 209390675 | 31.27 % | 180436878 | 26.95 % |
| Base Counts Overall N | 17473814 | 1.30 % | 8733657 | 1.30 % | 8740157 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.03858167499833367 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5253304 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8695850 |
| 76 | 8695850 |
| Insert Size Histogram |
|---|
 |