/EXTERNAL BLUEPRINT/K011944_K011945_K011947_3_lane_gembs/EXTERNAL-K011945_1894887_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20771180 | 100.00 % | 10385590 | 100.00 % | 10385590 | 100.00 % |
| General Reads | 11382867 | 54.80 % | 5734321 | 55.21 % | 5648546 | 54.39 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 3 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9388309 | 45.20 % | 4651266 | 44.79 % | 4737043 | 45.61 % |
| Bisulfite_reads C2T | 5865574 | 28.24 % | 2953802 | 28.44 % | 2911772 | 28.04 % |
| Bisulfite_reads G2A | 5517297 | 26.56 % | 2780522 | 26.77 % | 2736775 | 26.35 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4399446 |
| Average Unique | 42.36 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 449425170 | 28.10 % | 211334031 | 26.43 % | 238091139 | 29.77 % |
| Base Counts Overall C | 335251940 | 20.96 % | 144109309 | 18.02 % | 191142631 | 23.90 % |
| Base Counts Overall G | 344848463 | 21.56 % | 195555887 | 24.45 % | 149292576 | 18.67 % |
| Base Counts Overall T | 448984540 | 28.07 % | 238260257 | 29.79 % | 210724283 | 26.35 % |
| Base Counts Overall N | 20870747 | 1.30 % | 10430946 | 1.30 % | 10439801 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5424973 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10385590 |
| 76 | 10385590 |
| Insert Size Histogram |
|---|
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