/EXTERNAL BLUEPRINT/K011944_K011945_K011947_3_lane_gembs/EXTERNAL-K011947_1894889_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 44689334 | 100.00 % | 22344667 | 100.00 % | 22344667 | 100.00 % |
| General Reads | 33678106 | 75.36 % | 16964684 | 75.92 % | 16713422 | 74.80 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 5 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11011219 | 24.64 % | 5379978 | 24.08 % | 5631241 | 25.20 % |
| Bisulfite_reads C2T | 17335781 | 38.79 % | 8730168 | 39.07 % | 8605613 | 38.51 % |
| Bisulfite_reads G2A | 16342334 | 36.57 % | 8234521 | 36.85 % | 8107813 | 36.29 % |
| Concept | Value |
|---|---|
| Unique Fragments | 13003624 |
| Average Unique | 58.20 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1093429526 | 31.78 % | 463797851 | 26.96 % | 629631675 | 36.60 % |
| Base Counts Overall C | 601274009 | 17.47 % | 187268764 | 10.88 % | 414005245 | 24.06 % |
| Base Counts Overall G | 618462472 | 17.97 % | 424094256 | 24.65 % | 194368216 | 11.30 % |
| Base Counts Overall T | 1083008482 | 31.47 % | 622936132 | 36.21 % | 460072350 | 26.74 % |
| Base Counts Overall N | 44904229 | 1.30 % | 22442356 | 1.30 % | 22461873 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 16006455 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 22344667 |
| 76 | 22344667 |
| Insert Size Histogram |
|---|
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