/EXTERNAL BLUEPRINT/methylation/K011944_K011945_K011947_3_lane_gembs
BACK
SAMPLE K011944_K011945_K011947_3_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
11220960 |
821 |
0.01 % |
| NonRefCpG |
685515 |
3 |
0.00 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
1840284 |
14.35 % |
94 |
4.33 % |
166288 |
22.28 % |
0 |
1.86 % |
| Intermediate (0.3-0.7) |
4761664 |
37.14 % |
590 |
26.98 % |
284482 |
38.11 % |
4 |
25.99 % |
| Methylated (0.7-1) |
6219075 |
48.51 % |
1503 |
68.70 % |
295745 |
39.62 % |
12 |
72.15 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.680 |
|
0.830 |
|
0.600 |
|
0.860 |
|