/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011951_1894893_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 25034620 | 100.00 % | 12517310 | 100.00 % | 12517310 | 100.00 % |
| General Reads | 15089815 | 60.28 % | 7621784 | 60.89 % | 7468031 | 59.66 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9944797 | 39.72 % | 4895522 | 39.11 % | 5049275 | 40.34 % |
| Bisulfite_reads C2T | 7778702 | 31.07 % | 3927762 | 31.38 % | 3850940 | 30.76 % |
| Bisulfite_reads G2A | 7311121 | 29.20 % | 3694026 | 29.51 % | 3617095 | 28.90 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5849609 |
| Average Unique | 46.73 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 543423240 | 28.19 % | 253999265 | 26.35 % | 289423975 | 30.03 % |
| Base Counts Overall C | 402118676 | 20.86 % | 174859844 | 18.14 % | 227258832 | 23.58 % |
| Base Counts Overall G | 413823139 | 21.47 % | 233255816 | 24.20 % | 180567323 | 18.73 % |
| Base Counts Overall T | 543041290 | 28.17 % | 289141326 | 30.00 % | 253899964 | 26.34 % |
| Base Counts Overall N | 25259395 | 1.31 % | 12576619 | 1.30 % | 12682776 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7197403 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12517310 |
| 76 | 12517310 |
| Insert Size Histogram |
|---|
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