/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011953_1894895_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28355004 | 100.00 % | 14177502 | 100.00 % | 14177502 | 100.00 % |
| General Reads | 22732755 | 80.17 % | 11420447 | 80.55 % | 11312308 | 79.79 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 9 | 0.00 % | 8 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5622240 | 19.83 % | 2757047 | 19.45 % | 2865193 | 20.21 % |
| Bisulfite_reads C2T | 11698077 | 41.26 % | 5875020 | 41.44 % | 5823057 | 41.07 % |
| Bisulfite_reads G2A | 11034687 | 38.92 % | 5545435 | 39.11 % | 5489252 | 38.72 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8864626 |
| Average Unique | 62.53 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 601699566 | 27.56 % | 304061959 | 27.85 % | 297637607 | 27.26 % |
| Base Counts Overall C | 472521240 | 21.64 % | 249426270 | 22.85 % | 223094970 | 20.44 % |
| Base Counts Overall G | 473109833 | 21.67 % | 224085833 | 20.53 % | 249024000 | 22.81 % |
| Base Counts Overall T | 607137487 | 27.81 % | 299752933 | 27.46 % | 307384554 | 28.16 % |
| Base Counts Overall N | 28867182 | 1.32 % | 14340659 | 1.31 % | 14526523 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10756770 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14177502 |
| 76 | 14177502 |
| Insert Size Histogram |
|---|
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