/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011955_1894897_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22013730 | 100.00 % | 11006865 | 100.00 % | 11006865 | 100.00 % |
| General Reads | 14270023 | 64.82 % | 7187379 | 65.30 % | 7082644 | 64.35 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7743705 | 35.18 % | 3819485 | 34.70 % | 3924220 | 35.65 % |
| Bisulfite_reads C2T | 7347881 | 33.38 % | 3699872 | 33.61 % | 3648009 | 33.14 % |
| Bisulfite_reads G2A | 6922144 | 31.44 % | 3487508 | 31.68 % | 3434636 | 31.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5503839 |
| Average Unique | 50.00 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 499703681 | 29.48 % | 228473323 | 26.96 % | 271230358 | 32.00 % |
| Base Counts Overall C | 333978494 | 19.70 % | 143573967 | 16.94 % | 190404527 | 22.47 % |
| Base Counts Overall G | 338896653 | 19.99 % | 192768703 | 22.74 % | 146127950 | 17.24 % |
| Base Counts Overall T | 500088195 | 29.50 % | 271585815 | 32.04 % | 228502380 | 26.96 % |
| Base Counts Overall N | 22390187 | 1.32 % | 11126797 | 1.31 % | 11263390 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6764384 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11006865 |
| 76 | 11006865 |
| Insert Size Histogram |
|---|
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