/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011971_1894913_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26245468 | 100.00 % | 13122734 | 100.00 % | 13122734 | 100.00 % |
| General Reads | 16175757 | 61.63 % | 8180498 | 62.34 % | 7995259 | 60.93 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 14 | 0.00 % | 5 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10069697 | 38.37 % | 4942231 | 37.66 % | 5127466 | 39.07 % |
| Bisulfite_reads C2T | 8348393 | 31.81 % | 4220104 | 32.16 % | 4128289 | 31.46 % |
| Bisulfite_reads G2A | 7827378 | 29.82 % | 3960399 | 30.18 % | 3866979 | 29.47 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6232047 |
| Average Unique | 47.49 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 588913761 | 29.14 % | 262562771 | 25.98 % | 326350990 | 32.30 % |
| Base Counts Overall C | 402831217 | 19.93 % | 159063135 | 15.74 % | 243768082 | 24.12 % |
| Base Counts Overall G | 414822491 | 20.53 % | 250138813 | 24.76 % | 164683678 | 16.30 % |
| Base Counts Overall T | 587856545 | 29.09 % | 325502608 | 32.21 % | 262353937 | 25.96 % |
| Base Counts Overall N | 26477022 | 1.31 % | 13183191 | 1.30 % | 13293831 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7686840 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13122734 |
| 76 | 13122734 |
| Insert Size Histogram |
|---|
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