/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 241391562 | 100.00 % | 120695781 | 100.00 % | 120695781 | 100.00 % |
| General Reads | 161617674 | 66.95 % | 81389538 | 67.43 % | 80228136 | 66.47 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 88 | 0.00 % | 49 | 0.00 % | 39 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 79773800 | 33.05 % | 39306194 | 32.57 % | 40467606 | 33.53 % |
| Bisulfite_reads C2T | 83318314 | 34.52 % | 41945393 | 34.75 % | 41372921 | 34.28 % |
| Bisulfite_reads G2A | 78299448 | 32.44 % | 39444194 | 32.68 % | 38855254 | 32.19 % |
| Concept | Value |
|---|---|
| Unique Fragments | 62666330 |
| Average Unique | 51.92 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 5437439527 | 29.25 % | 2495413498 | 26.85 % | 2942026029 | 31.66 % |
| Base Counts Overall C | 3704473173 | 19.93 % | 1601022648 | 17.23 % | 2103450525 | 22.63 % |
| Base Counts Overall G | 3764692624 | 20.25 % | 2132164061 | 22.94 % | 1632528563 | 17.57 % |
| Base Counts Overall T | 5435377948 | 29.24 % | 2943109761 | 31.67 % | 2492268187 | 26.82 % |
| Base Counts Overall N | 245167002 | 1.32 % | 121865169 | 1.31 % | 123301833 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 76757064 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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