/EXTERNAL BLUEPRINT/methylation/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs
BACK
SAMPLE K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
15009833 |
16946 |
0.11 % |
| NonRefCpG |
777574 |
40 |
0.01 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
2492314 |
13.41 % |
862 |
2.03 % |
198986 |
22.18 % |
19 |
7.17 % |
| Intermediate (0.3-0.7) |
6755178 |
36.36 % |
7300 |
17.20 % |
337851 |
37.65 % |
61 |
22.92 % |
| Methylated (0.7-1) |
9333636 |
50.23 % |
34291 |
80.77 % |
360477 |
40.17 % |
188 |
69.91 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.700 |
|
0.880 |
|
0.610 |
|
0.830 |
|