/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011956_1894898_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 29883430 | 100.00 % | 14941715 | 100.00 % | 14941715 | 100.00 % |
| General Reads | 15715053 | 52.59 % | 7925668 | 53.04 % | 7789385 | 52.13 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 101 | 0.00 % | 51 | 0.00 % | 50 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14168276 | 47.41 % | 7015996 | 46.96 % | 7152280 | 47.87 % |
| Bisulfite_reads C2T | 8089432 | 27.07 % | 4079333 | 27.30 % | 4010099 | 26.84 % |
| Bisulfite_reads G2A | 7625722 | 25.52 % | 3846386 | 25.74 % | 3779336 | 25.29 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6135343 |
| Average Unique | 41.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 664404014 | 28.87 % | 297412615 | 25.85 % | 366991399 | 31.90 % |
| Base Counts Overall C | 464273503 | 20.18 % | 194207785 | 16.88 % | 270065718 | 23.47 % |
| Base Counts Overall G | 482408828 | 20.96 % | 280192909 | 24.35 % | 202215919 | 17.58 % |
| Base Counts Overall T | 659945005 | 28.68 % | 363706393 | 31.61 % | 296238612 | 25.75 % |
| Base Counts Overall N | 29992760 | 1.30 % | 14992353 | 1.30 % | 15000407 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7523701 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14941715 |
| 76 | 14941715 |
| Insert Size Histogram |
|---|
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