/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011957_1894899_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26202438 | 100.00 % | 13101219 | 100.00 % | 13101219 | 100.00 % |
| General Reads | 14826633 | 56.58 % | 7448237 | 56.85 % | 7378396 | 56.32 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 3 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11375802 | 43.42 % | 5652979 | 43.15 % | 5722823 | 43.68 % |
| Bisulfite_reads C2T | 7628930 | 29.12 % | 3831372 | 29.24 % | 3797558 | 28.99 % |
| Bisulfite_reads G2A | 7197706 | 27.47 % | 3616868 | 27.61 % | 3580838 | 27.33 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5846399 |
| Average Unique | 44.62 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 538608617 | 26.70 % | 265357425 | 26.30 % | 273251192 | 27.09 % |
| Base Counts Overall C | 452641808 | 22.43 % | 224938126 | 22.30 % | 227703682 | 22.57 % |
| Base Counts Overall G | 459341662 | 22.77 % | 230644333 | 22.86 % | 228697329 | 22.67 % |
| Base Counts Overall T | 540299131 | 26.78 % | 274599384 | 27.22 % | 265699747 | 26.34 % |
| Base Counts Overall N | 26696508 | 1.32 % | 13254595 | 1.31 % | 13441913 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7097537 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13101219 |
| 76 | 13101219 |
| Insert Size Histogram |
|---|
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