/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011958_1894900_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20540006 | 100.00 % | 10270003 | 100.00 % | 10270003 | 100.00 % |
| General Reads | 9021211 | 43.92 % | 4536668 | 44.17 % | 4484543 | 43.67 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11518785 | 56.08 % | 5733330 | 55.83 % | 5785455 | 56.33 % |
| Bisulfite_reads C2T | 4660733 | 22.69 % | 2343137 | 22.82 % | 2317596 | 22.57 % |
| Bisulfite_reads G2A | 4360488 | 21.23 % | 2193536 | 21.36 % | 2166952 | 21.10 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3476511 |
| Average Unique | 33.85 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 433277020 | 27.40 % | 198888969 | 25.15 % | 234388051 | 29.64 % |
| Base Counts Overall C | 343985396 | 21.75 % | 149964678 | 18.96 % | 194020718 | 24.54 % |
| Base Counts Overall G | 352121724 | 22.26 % | 197764091 | 25.01 % | 154357633 | 19.52 % |
| Base Counts Overall T | 431343997 | 27.27 % | 233798893 | 29.57 % | 197545104 | 24.98 % |
| Base Counts Overall N | 20852325 | 1.32 % | 10373600 | 1.31 % | 10478725 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4274355 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10270003 |
| 76 | 10270003 |
| Insert Size Histogram |
|---|
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