/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011959_1894901_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26286950 | 100.00 % | 13143475 | 100.00 % | 13143475 | 100.00 % |
| General Reads | 13880281 | 52.80 % | 6982032 | 53.12 % | 6898249 | 52.48 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 17 | 0.00 % | 8 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 12406652 | 47.20 % | 6161435 | 46.88 % | 6245217 | 47.52 % |
| Bisulfite_reads C2T | 7155180 | 27.22 % | 3598457 | 27.38 % | 3556723 | 27.06 % |
| Bisulfite_reads G2A | 6725118 | 25.58 % | 3383583 | 25.74 % | 3341535 | 25.42 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5459202 |
| Average Unique | 41.54 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 533858872 | 26.38 % | 265340993 | 26.22 % | 268517879 | 26.53 % |
| Base Counts Overall C | 460197967 | 22.74 % | 227751258 | 22.50 % | 232446709 | 22.97 % |
| Base Counts Overall G | 467572870 | 23.10 % | 235815201 | 23.30 % | 231757669 | 22.90 % |
| Base Counts Overall T | 535776421 | 26.47 % | 269860318 | 26.66 % | 265916103 | 26.28 % |
| Base Counts Overall N | 26689020 | 1.32 % | 13279805 | 1.31 % | 13409215 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6643144 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13143475 |
| 76 | 13143475 |
| Insert Size Histogram |
|---|
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