/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011960_1894902_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22471924 | 100.00 % | 11235962 | 100.00 % | 11235962 | 100.00 % |
| General Reads | 17372028 | 77.31 % | 8733048 | 77.72 % | 8638980 | 76.89 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5099896 | 22.69 % | 2502914 | 22.28 % | 2596982 | 23.11 % |
| Bisulfite_reads C2T | 8965608 | 39.90 % | 4506418 | 40.11 % | 4459190 | 39.69 % |
| Bisulfite_reads G2A | 8406420 | 37.41 % | 4226630 | 37.62 % | 4179790 | 37.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6636206 |
| Average Unique | 59.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 566691997 | 32.75 % | 228005879 | 26.35 % | 338686118 | 39.15 % |
| Base Counts Overall C | 287107213 | 16.59 % | 75319456 | 8.71 % | 211787757 | 24.48 % |
| Base Counts Overall G | 292461392 | 16.90 % | 214358009 | 24.78 % | 78103383 | 9.03 % |
| Base Counts Overall T | 561282106 | 32.44 % | 336140572 | 38.85 % | 225141534 | 26.02 % |
| Base Counts Overall N | 22795440 | 1.32 % | 11345158 | 1.31 % | 11450282 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8177237 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11235962 |
| 76 | 11235962 |
| Insert Size Histogram |
|---|
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