/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011962_1894904_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 29537646 | 100.00 % | 14768823 | 100.00 % | 14768823 | 100.00 % |
| General Reads | 18912671 | 64.03 % | 9525467 | 64.50 % | 9387204 | 63.56 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 118 | 0.00 % | 59 | 0.00 % | 59 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10624857 | 35.97 % | 5243297 | 35.50 % | 5381560 | 36.44 % |
| Bisulfite_reads C2T | 9754243 | 33.02 % | 4911759 | 33.26 % | 4842484 | 32.79 % |
| Bisulfite_reads G2A | 9158546 | 31.01 % | 4613767 | 31.24 % | 4544779 | 30.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 7422655 |
| Average Unique | 50.26 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 686353400 | 30.18 % | 309468662 | 27.21 % | 376884738 | 33.14 % |
| Base Counts Overall C | 429695412 | 18.89 % | 172628352 | 15.18 % | 257067060 | 22.61 % |
| Base Counts Overall G | 443111553 | 19.48 % | 264948430 | 23.30 % | 178163123 | 15.67 % |
| Base Counts Overall T | 685592385 | 30.14 % | 375334511 | 33.01 % | 310257874 | 27.28 % |
| Base Counts Overall N | 29645992 | 1.30 % | 14819416 | 1.30 % | 14826576 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 9121976 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14768823 |
| 76 | 14768823 |
| Insert Size Histogram |
|---|
 |