/EXTERNAL BLUEPRINT/K011956_K011957_K011958_K011959_K011960_K011961_K011962_K011963_8_lane_gembs/EXTERNAL-K011963_1894905_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28705774 | 100.00 % | 14352887 | 100.00 % | 14352887 | 100.00 % |
| General Reads | 24786626 | 86.35 % | 12472415 | 86.90 % | 12314211 | 85.80 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 29 | 0.00 % | 14 | 0.00 % | 15 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3919119 | 13.65 % | 1880458 | 13.10 % | 2038661 | 14.20 % |
| Bisulfite_reads C2T | 12789489 | 44.55 % | 6434472 | 44.83 % | 6355017 | 44.28 % |
| Bisulfite_reads G2A | 11997166 | 41.79 % | 6037957 | 42.07 % | 5959209 | 41.52 % |
| Concept | Value |
|---|---|
| Unique Fragments | 9643270 |
| Average Unique | 67.19 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 767438332 | 34.72 % | 305220534 | 27.62 % | 462217798 | 41.82 % |
| Base Counts Overall C | 320524465 | 14.50 % | 57334953 | 5.19 % | 263189512 | 23.81 % |
| Base Counts Overall G | 333048654 | 15.07 % | 271412576 | 24.56 % | 61636078 | 5.58 % |
| Base Counts Overall T | 760529299 | 34.41 % | 456804278 | 41.33 % | 303725021 | 27.48 % |
| Base Counts Overall N | 28803848 | 1.30 % | 14399958 | 1.30 % | 14403890 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 11854300 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14352887 |
| 76 | 14352887 |
| Insert Size Histogram |
|---|
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