/EXTERNAL BLUEPRINT/K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs/EXTERNAL-K011964_1894906_2

BACK

SAMPLE K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs LANE EXTERNAL-K011964_1894906_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 26077238 100.00 % 13038619 100.00 % 13038619 100.00 %
General Reads 19358904 74.24 % 9743116 74.73 % 9615788 73.75 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 6718334 25.76 % 3295503 25.27 % 3422831 26.25 %
Bisulfite_reads C2T 10015204 38.41 % 5039291 38.65 % 4975913 38.16 %
Bisulfite_reads G2A 9343700 35.83 % 4703825 36.08 % 4639875 35.59 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 7516021
Average Unique 57.64 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 653877770 32.56 % 272526889 27.14 % 381350881 37.98 %
Base Counts Overall C 333300319 16.60 % 96913258 9.65 % 236387061 23.55 %
Base Counts Overall G 343681160 17.12 % 242803697 24.18 % 100877463 10.05 %
Base Counts Overall T 650916585 32.42 % 378648110 37.71 % 272268475 27.12 %
Base Counts Overall N 26171492 1.30 % 13081709 1.30 % 13089783 1.30 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 9277752



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011964_1894906_2.mapq.png



Read Length

Read Length Reads
76 13038619
76 13038619



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011964_1894906_2.isize.png