/EXTERNAL BLUEPRINT/K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs/EXTERNAL-K011965_1894907_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 48731146 | 100.00 % | 24365573 | 100.00 % | 24365573 | 100.00 % |
| General Reads | 17146426 | 35.19 % | 8624720 | 35.40 % | 8521706 | 34.97 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 31584720 | 64.81 % | 15740853 | 64.60 % | 15843867 | 65.03 % |
| Bisulfite_reads C2T | 8840510 | 18.14 % | 4444756 | 18.24 % | 4395754 | 18.04 % |
| Bisulfite_reads G2A | 8305916 | 17.04 % | 4179964 | 17.16 % | 4125952 | 16.93 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6591959 |
| Average Unique | 27.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 993137605 | 26.47 % | 468881201 | 24.99 % | 524256404 | 27.94 % |
| Base Counts Overall C | 854828098 | 22.78 % | 406478303 | 21.67 % | 448349795 | 23.90 % |
| Base Counts Overall G | 886632339 | 23.63 % | 463994704 | 24.73 % | 422637635 | 22.53 % |
| Base Counts Overall T | 968202866 | 25.80 % | 512174190 | 27.30 % | 456028676 | 24.31 % |
| Base Counts Overall N | 49497334 | 1.32 % | 24620723 | 1.31 % | 24876611 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8094309 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 24365573 |
| 76 | 24365573 |
| Insert Size Histogram |
|---|
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