/EXTERNAL BLUEPRINT/K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs/EXTERNAL-K011966_1894908_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 29723716 | 100.00 % | 14861858 | 100.00 % | 14861858 | 100.00 % |
| General Reads | 16071425 | 54.07 % | 8084273 | 54.40 % | 7987152 | 53.74 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 2 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 13652288 | 45.93 % | 6777583 | 45.60 % | 6874705 | 46.26 % |
| Bisulfite_reads C2T | 8295872 | 27.91 % | 4171425 | 28.07 % | 4124447 | 27.75 % |
| Bisulfite_reads G2A | 7775556 | 26.16 % | 3912850 | 26.33 % | 3862706 | 25.99 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6266998 |
| Average Unique | 42.17 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 627656929 | 27.42 % | 298399483 | 26.08 % | 329257446 | 28.77 % |
| Base Counts Overall C | 496981986 | 21.71 % | 231088613 | 20.19 % | 265893373 | 23.24 % |
| Base Counts Overall G | 505611608 | 22.09 % | 269429665 | 23.54 % | 236181943 | 20.64 % |
| Base Counts Overall T | 628297412 | 27.45 % | 330430345 | 28.87 % | 297867067 | 26.03 % |
| Base Counts Overall N | 30178197 | 1.32 % | 15014960 | 1.31 % | 15163237 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7669814 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14861858 |
| 76 | 14861858 |
| Insert Size Histogram |
|---|
 |