/EXTERNAL BLUEPRINT/K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs/EXTERNAL-K011967_1894909_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27249122 | 100.00 % | 13624561 | 100.00 % | 13624561 | 100.00 % |
| General Reads | 11385286 | 41.78 % | 5726431 | 42.03 % | 5658855 | 41.53 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15863836 | 58.22 % | 7898130 | 57.97 % | 7965706 | 58.47 % |
| Bisulfite_reads C2T | 5866298 | 21.53 % | 2949669 | 21.65 % | 2916629 | 21.41 % |
| Bisulfite_reads G2A | 5518988 | 20.25 % | 2776762 | 20.38 % | 2742226 | 20.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4451912 |
| Average Unique | 32.68 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 563239144 | 26.84 % | 272228009 | 25.95 % | 291011135 | 27.74 % |
| Base Counts Overall C | 466698382 | 22.24 % | 225009140 | 21.45 % | 241689242 | 23.04 % |
| Base Counts Overall G | 475957121 | 22.68 % | 245666981 | 23.42 % | 230290140 | 21.95 % |
| Base Counts Overall T | 564617943 | 26.91 % | 292420524 | 27.87 % | 272197419 | 25.95 % |
| Base Counts Overall N | 27669804 | 1.32 % | 13766543 | 1.31 % | 13903261 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5424397 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13624561 |
| 76 | 13624561 |
| Insert Size Histogram |
|---|
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