/EXTERNAL BLUEPRINT/K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs/EXTERNAL-K011969_1894911_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 100018236 | 100.00 % | 50009118 | 100.00 % | 50009118 | 100.00 % |
| General Reads | 85981666 | 85.97 % | 43186515 | 86.36 % | 42795151 | 85.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 2 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14036564 | 14.03 % | 6822601 | 13.64 % | 7213963 | 14.43 % |
| Bisulfite_reads C2T | 44383379 | 44.38 % | 22286480 | 44.56 % | 22096899 | 44.19 % |
| Bisulfite_reads G2A | 41598293 | 41.59 % | 20900037 | 41.79 % | 20698256 | 41.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 33171249 |
| Average Unique | 66.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2191300255 | 28.45 % | 1081325604 | 28.08 % | 1109974651 | 28.83 % |
| Base Counts Overall C | 1592918748 | 20.68 % | 789044180 | 20.49 % | 803874568 | 20.88 % |
| Base Counts Overall G | 1617773554 | 21.01 % | 813171737 | 21.12 % | 804601817 | 20.89 % |
| Base Counts Overall T | 2197824290 | 28.54 % | 1116625016 | 29.00 % | 1081199274 | 28.08 % |
| Base Counts Overall N | 101587325 | 1.32 % | 50535549 | 1.31 % | 51051776 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 41133314 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 50009118 |
| 76 | 50009118 |
| Insert Size Histogram |
|---|
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