/EXTERNAL BLUEPRINT/methylation/K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs
BACK
SAMPLE K011964_K011965_K011966_K011967_K011968_K011969_K011970_7_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
14183469 |
10741 |
0.08 % |
| NonRefCpG |
749198 |
22 |
0.00 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
2310992 |
13.43 % |
597 |
2.19 % |
177692 |
20.83 % |
10 |
5.87 % |
| Intermediate (0.3-0.7) |
6275751 |
36.47 % |
4767 |
17.48 % |
321131 |
37.65 % |
44 |
24.23 % |
| Methylated (0.7-1) |
8621285 |
50.10 % |
21909 |
80.33 % |
354187 |
41.52 % |
127 |
69.90 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.700 |
|
0.870 |
|
0.620 |
|
0.830 |
|