/EXTERNAL BLUEPRINT/K011972_K011976_K012000_K012001_4_lane_gembs/EXTERNAL-K011972_1894914_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 59112138 | 100.00 % | 29556069 | 100.00 % | 29556069 | 100.00 % |
| General Reads | 53769979 | 90.96 % | 27068891 | 91.58 % | 26701088 | 90.34 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 2 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5342154 | 9.04 % | 2487176 | 8.42 % | 2854978 | 9.66 % |
| Bisulfite_reads C2T | 27775693 | 46.99 % | 13978151 | 47.29 % | 13797542 | 46.68 % |
| Bisulfite_reads G2A | 25994291 | 43.97 % | 13090742 | 44.29 % | 12903549 | 43.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 19898496 |
| Average Unique | 67.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1629894438 | 35.81 % | 627332172 | 27.57 % | 1002562266 | 44.05 % |
| Base Counts Overall C | 624770139 | 13.73 % | 76047692 | 3.34 % | 548722447 | 24.11 % |
| Base Counts Overall G | 644093272 | 14.15 % | 557249588 | 24.49 % | 86843684 | 3.82 % |
| Base Counts Overall T | 1592986204 | 35.00 % | 985424374 | 43.30 % | 607561830 | 26.70 % |
| Base Counts Overall N | 59890573 | 1.32 % | 29763487 | 1.31 % | 30127086 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 24616470 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 29556069 |
| 76 | 29556069 |
| Insert Size Histogram |
|---|
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