/EXTERNAL BLUEPRINT/K011972_K011976_K012000_K012001_4_lane_gembs/EXTERNAL-K011976_1894918_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17628566 | 100.00 % | 8814283 | 100.00 % | 8814283 | 100.00 % |
| General Reads | 6786567 | 38.50 % | 3420808 | 38.81 % | 3365759 | 38.19 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10841995 | 61.50 % | 5393473 | 61.19 % | 5448522 | 61.81 % |
| Bisulfite_reads C2T | 3503542 | 19.87 % | 1765207 | 20.03 % | 1738335 | 19.72 % |
| Bisulfite_reads G2A | 3283029 | 18.62 % | 1655603 | 18.78 % | 1627426 | 18.46 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2561064 |
| Average Unique | 29.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 444875928 | 32.77 % | 161066971 | 23.73 % | 283808957 | 41.82 % |
| Base Counts Overall C | 222448294 | 16.39 % | 42447376 | 6.25 % | 180000918 | 26.52 % |
| Base Counts Overall G | 230778783 | 17.00 % | 184234782 | 27.15 % | 46544001 | 6.86 % |
| Base Counts Overall T | 441440282 | 32.52 % | 282077136 | 41.56 % | 159363146 | 23.48 % |
| Base Counts Overall N | 17856295 | 1.32 % | 8873526 | 1.31 % | 8982769 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3168373 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8814283 |
| 76 | 8814283 |
| Insert Size Histogram |
|---|
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